text.skipToContent text.skipToNavigation

PyroMark Supplementary Software

For expanded assay setup and analysis with PyroMark systems
  • User-friendly interface increases the range of analyses available
  • Driven by drop-down menus to ensure correct selection of parameters
  • Enable user-designed assays with algorithms for optimization of primers
PyroMark supplementary software expands assay flexibility and analysis breadth of Pyrosequencing analysis. Intuitive and user-friendly, these software products give the user access to optimized assay design for genotyping, allele quantification, methylation analysis, and de novo sequencing, as well as a framework for sequence comparison with entries in a local sequence database.

Buy Products

Cat No./ID: 9019067
PyroMark CpG SW 1.0
CpG methylation analysis software
Cat No./ID: 9019068
PyroMark CpG SW 1.0 (5)
Five additional software licenses. Requires PyroMark CpG SW 1.0
Cat No./ID: 9019077
PyroMark Assay Design SW 2.0
Software for convenient design of PCR and sequencing primers, optimized for Pyrosequencing analysis
Cat No./ID: 9019079
PyroMark Assay Design SW 2.0 (5)
Five additional software licenses. Requires PyroMark Assay Design SW 2.0
Cat No./ID: 9019087
PyroMark IdentiFire SW 1.0
Software for comparing and matching Pyrosequencing data to a local database
Cat No./ID: 9019088
PyroMark IdentiFire SW 1.0 (5)
Five additional software licenses. Requires PyroMark IdentiFire SW 1.0
The PyroMark Supplementary Software is intended for molecular biology applications. This product is not intended for the diagnosis, prevention, or treatment of a disease.

Product Details

PyroMark Assay Design SW 2.0
The flexible PyroMark Assay Design Software 2.0 optimizes Pyrosequencing analyses. Featuring algorithms for full quality control and smooth import of assays into any PyroMark instrument, this software was constructed based on years of expertise in Pyrosequencing and PCR optimization. With a few clicks, the software designs PCR and sequencing primers for genotyping, allele quantification, sequence analysis, and methylation analysis. For methylation analysis, the software anticipates the bisulfite converted sequence and highlights CpG sites and non-CpG cytosines that can serve as controls.
PyroMark CpG SW 1.0
When analyzing multiple samples, each potentially with several methylation sites, it is important to have the aid of software that enables visualization of sequence-wide patterns, as well as details of specific variable positions. CpG analysis with PyroMark CpG SW 1.0 for the PyroMark Q96 ID and PyroMark Q96 MD provide that functionality. Standard calculations include methylation frequency, quality assessment, mean methylation values per well and replicates, statistical methylation patterns of multiple consecutive sites, and deviation from expected methylation patterns. Results are displayed in simple-to-understand graphical and numerical representations.
PyroMark IdentiFire SW 1.0
PyroMark IdentiFire SW 1.0 facilitates the compilation of a local sequence database, against which Pyrosequencing output are rapidly matched. The raw data, matched hits, and percent concordance of each hit are presented in detailed identification reports. This software is designed to interface directly with the PyroMark Q96 ID, but it also accepts run files imported from the PyroMark Q24.

Product Resources

You are not authorized to download the resource

FAQs (20)
FAQ ID -2818
FAQ ID -2825
FAQ ID -2842
FAQ ID -2845
FAQ ID -2848
FAQ ID -2849
FAQ ID -2851
FAQ ID -2862
FAQ ID -2866
FAQ ID -2871
FAQ ID -2872
FAQ ID -2875
FAQ ID -2877
FAQ ID -2878
FAQ ID -2879
FAQ ID -2881
FAQ ID -2832
FAQ ID -2826
FAQ ID -2850

Operating Software (1)
PyroMark Assay Design Software version 2.0.2 is compatible with Windows 7 and Windows 10 (64 bit) operating systems. This software may only be downloaded by registered users with a valid PyroMark Assay Design Software license. If you do not have a valid software license, contact your QIAGEN sales representative.
Show details
fragment fix placeholder

Customers who bought these products also bought

  • Cat No./ID: 205113

    Omniscript RT Kit (200)

    For 200 reverse-transcription reactions: 800 units Omniscript Reverse Transcriptase, 4 x 150 µl 10x Buffer RT, 4 x 100 µl dNTP Mix (contains 5 mM each dNTP), 4 x 1.1 ml RNase-free water