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miScript Single Cell qPCR Kit

Universal quantification solution for precision miRNA profiling from individual cells
  • Quantification of miRNA from single cells 
  • Ultra-low starting amounts of total RNA
  • Enables cell lysis, universal miRNA cDNA synthesis and preamplification
  • All miRNAs are converted into cDNA and preamplified
  • Preamp allows use of minute amounts of total RNA as starting material
  • Integrated, free data analysis solutions
  • 1 cell + 1 kit with a streamlined robust workflow = endless miRNA possibilities

The miScript Single Cell qPCR Kit includes reagents for cell lysis, cDNA synthesis and unbiased preamplification of all microRNAs (miRNAs), facilitating the expression analysis of miRNAs from individual cells. One to 100 cells or 25 pg to 1 ng of purified RNA is required as template for each miScript Single Cell qPCR Kit reaction. Unlike other single-cell miRNA expression products, the miScript Single Cell qPCR Kit is a completely universal kit. Starting from a single cell, all miRNAs, both annotated and non-annotated, are selectively converted into cDNA and subsequently amplified. There is no fractionation of the sample or selection of specific miRNAs required. From cell lysis through preamplification, the miScript Single Cell qPCR Kit is a robust, universal solution for precision single-cell miRNA expression. An entire miRNome expression profile can be generated from an individual cell – explore the power of one. 

Why is single cell analysis important?

Tissues are heterogeneous mixtures of different cell populations with each cell contributing a unique proteome and transcriptome. For example, normal and disease-biology are both inherently heterogeneous, and cells can respond individually and in concert to internal and external stimuli. Further, individual cells can differ due to epigenetics, circadian clock, cell cycle, microenvironments, cell-to-cell contacts and intrinsic transcriptional “noise.” While bulk transcriptomic analysis of mRNA, lncRNA and miRNA expression is critical for understanding biological systems, the consequential “cellular averages” mask intrinsic transcriptional variability across individual cell subpopulations. In fact, the contribution of rare cell subtypes may be completely obscured when cells are assessed in bulk. Single-cell expression analysis brings into focus the individual contribution of every cell, providing a complete, granular understanding of a specific biological response.

Cat No./ID: 331053
miScript Single Cell qPCR Kit (24)
€969.00
Add To Cart
For 24 reactions: Cell lysis, 3’ ligation, 5’ ligation, reverse-transcription, cDNA cleanup, preamplification reagents, quality control primers
Cat No./ID: 331055
miScript Single Cell qPCR Kit (96)
€3,010.00
Add To Cart
For 96 reactions: Cell lysis, 3’ ligation, 5’ ligation, reverse-transcription, cDNA cleanup, preamplification reagents, quality control primers
The miScript Single Cell qPCR Kit is intended for molecular biology applications. This product is not intended for the diagnosis, prevention, or treatment of a disease.
Principle

Mature miRNAs are naturally occurring, 22-nucleotide, non-coding RNAs that mediate posttranscriptional gene regulation. Animal mature miRNAs possess a 3’ hydroxyl group and a 5’ phosphate group (unlike most other cellular RNAs). Due to this, adapters can be ligated to both the 3’ end and 5’ end of mature miRNAs, enabling universal reverse-transcription and preamplification, while minimizing the background from other RNA species. The miScript Single Cell qPCR Kit includes all of the reagents required to perform cell lysis through preamplification in a streamlined, integrated workflow.

Procedure

With the miScript Single Cell qPCR Kit, you can go from a single cell or minute amounts of purified RNA to isolated and amplified miRNAs in a single, streamlined workflow. There is no fractionation of the sample or selection of specific miRNAs required. The kit integrates with our miScript miRNA PCR Arrays and miScript Primer Assay to allow you to reliably perform whole miRNome profiling, disease/pathway-specific miRNA expression analysis, or individual miRNA quantification from a single cell.

Real-time PCR for the Fluidigm BioMark System
Preamplified product from the miScript Single Cell qPCR Kit can serve as the template for real-time PCR on the Fluidigm BioMark System using either miScript miRNA PCR Arrays or miScript Primer Assays and the miScript Microfluidics PCR Kit. This specialized real-time PCR kit contains the miScript Microfluidics Universal Primer (reverse primer) and Microfluidics qPCR Master Mix (specifically optimized for the Fluidigm BioMark System; contains EvaGreen dye for detection and ROX passive reference dye). For more information, please refer to the miScript Microfluidics Handbook.

Real-time PCR for plate-based instruments
miScript miRNA PCR Arrays: Preamplified product from the miScript Single Cell qPCR Kit serves as the template for real-time PCR analysis using a miScript miRNA PCR Array in combination with the miScript SYBR Green Kit, which contains the miScript Universal Primer (reverse primer) and QuantiTect SYBR Green PCR Master Mix. For more information, please refer to the miScript miRNA PCR Array Handbook.

miScript Primer Assays: Preamplified product from the miScript Single Cell qPCR Kit serves as the template for real-time PCR analysis using a miScript Primer Assay and the miScript SYBR Green Kit. For more information, please refer to the miScript PCR System Handbook.

Integrated reaction controls

The miScript Single Cell qPCR Kit contains integrated reaction controls to monitor the 3’ ligation, 5’ ligation, reverse-transcription, preamplification and real-time PCR performance. Together, the controls monitor every critical step of the workflow and enable determination of the overall workflow’s performan

Data analysis
Free data analysis software tailored for single-cell miRNA expression analysis is available at GeneGlobe. The analysis software performs principle component analysis (PCA) and hierarchical clustering, and results are presented in a variety of visual formats.


Applications
The insights gained from the miScript Single Cell qPCR Kit can streamline discovery in numerous fields, including oncology, immunology, neurology and stem cell research. A key application relates to circulating tumor cells for non-invasive (liquid biopsy) biomarker development.
Features
Specifications
Applications PCR, qPCR, real-time RT-PCR, microarray
Applications PCR, qPCR, real-time RT-PCR, microarray
Elution volume 30 µl
Elution volume 30 µl
Format Spin column
Format Spin column
Main sample type Tissue, cells
Main sample type Tissue, cells
Processing Manual (centrifugation or vacuum)
Processing Manual (centrifugation or vacuum)
Purification of total RNA, miRNA, poly A+ mRNA, DNA or protein miRNA, total RNA
Purification of total RNA, miRNA, poly A+ mRNA, DNA or protein miRNA, total RNA
Sample amount 50–100 mg
Sample amount 50–100 mg
Technology Silica technology
Technology Silica technology
Yield Varies
Yield Varies

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Brochures & Guides (1)
Universal quantification solution for precision miRNA profiling from individual cells
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Kit Handbooks (1)
Universal quantification solution for precision miRNA profiling from individual cells
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Quick-Start Protocols (2)
Protocols: Cell Lysis, 3' Ligation, 5' Ligation, Reverse-Transcription
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Protocols: "Beads + Bind" Mixture Preparation, cDNA Cleanup, Preamplification
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White Papers (1)
Scientific article demonstrates QIAGEN'S miScript as the leading solution for miRNA discoveries
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